rs9878341 chr3:14508992 C>T
- Sequence
aggacagaggggccaggcacacag[C/T]aggtgcccagtacatgctcgaatt
- ASB in cell types
- A549 (lung carcinoma) neutrophils
- ASB for transcription factors
- CTCF_HUMAN SNAI2_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.65 | 0.77 | 1.52 | n/a | No Hit | |||
| SNAI2_HUMAN | 1.80 | -1.59 | 1.50 | -5.63 | Concordant | |||
| SMC3_HUMAN | -0.27 | 0.80 | 1.88 | n/a | n/a |
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Motif analysis
