rs9891800 chr17:35567996 G>C
- Sequence
cccttttgctccacccctgacgtt[G/C]gcctcggccttcgattggctgctc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293T (embryonic kidney)
- ASB for transcription factors
- CREB1_HUMAN MNT_HUMAN HDAC1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 2.08 | 0.23 | 1.60 | n/a | No Hit | |||
| MNT_HUMAN | 1.94 | -2.26 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.57 | -0.66 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.81 | -1.62 | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | 1.81 | -0.99 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Colon_Transverse, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid