rs9898809 chr17:50866574 C>T
- Sequence
gcctgcccctgtccggacgcgcgg[C/T]ggacgcaggggtggggaagccgca
- ASB in cell types
- A549 (lung carcinoma) T47D (invasive ductal carcinoma) cranial neural crest cells breast tumor tissue
- ASB for transcription factors
- JUN_HUMAN FOXK2_HUMAN HIF1A_HUMAN AP2A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.53 | -0.49 | 2.93 | n/a | No Hit | |||
| FOXK2_HUMAN | n/a | 2.22 | 1.33 | n/a | n/a | |||
| HIF1A_HUMAN | n/a | 2.58 | 2.00 | n/a | No Hit | |||
| AP2A_HUMAN | -1.80 | 2.26 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | -2.20 | 1.76 | 2.50 | n/a | No Hit |
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