rs9899243 chr17:65123370 G>A
- Sequence
caaactcagtgcactcaggacgct[G/A]tctgaaagaagccgaaagtgggca
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- EP400_HUMAN SNIP1_HUMAN HDAC1_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP400_HUMAN | 3.36 | n/a | 2.00 | n/a | n/a | |||
| SNIP1_HUMAN | 3.02 | n/a | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 2.17 | -1.21 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 2.29 | 0.91 | 2.00 | n/a | n/a | |||
| NR2C1_HUMAN | 2.28 | -2.10 | 2.00 | n/a | No Hit |
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