rs9901632 chr17:8138813 A>G
- Sequence
ataacgcgggagattctccaagga[A/G]agaaccagaaaacaaactgctttt
- ASB in cell types
- A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte COLO-829 (melanoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN JUN_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.71 | -0.28 | 2.69 | n/a | n/a | |||
| SMC3_HUMAN | 1.65 | -0.06 | 2.67 | n/a | n/a | |||
| CTCF_HUMAN | 0.90 | 0.31 | 1.75 | n/a | No Hit | |||
| JUN_HUMAN | 1.12 | -0.70 | 3.00 | n/a | No Hit | |||
| ATF3_HUMAN | 2.12 | n/a | 3.00 | n/a | No Hit |
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