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rs9901698 chr17:62805040 A>G

Sequence
ttatgaaatctcacatggtttatc[A/G]tctggccctgaacaatggggaaaa
ASB in cell types
T47D (invasive ductal carcinoma)
ASB for transcription factors
ESR1_HUMAN HIF1A_HUMAN HIF3A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.23 0.77 5.0·10-71.00 1.94 n/a No Hit
HIF1A_HUMAN 2.39 -3.65 2.8·10-31.00 2.00 n/a No Hit
HIF3A_HUMAN 2.09 n/a 0.011.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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