rs9913156 chr17:4721671 C>T
- Sequence
gctgtggctgtgttccagggtaaa[C/T]atcaaaacttgacttagtccaaac
- ASB in cell types
- HEK293 (embryonic kidney) CD34+ hematopoietic stem cells-derived proerythroblasts K562 (myelogenous leukemia) HAEC (human aortic endothelial cells)
- ASB for transcription factors
- GATA1_HUMAN JUN_HUMAN ZBT17_HUMAN ZEB2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | -1.19 | 2.13 | 1.78 | n/a | No Hit | |||
| JUN_HUMAN | n/a | 2.54 | 2.00 | n/a | No Hit | |||
| ZBT17_HUMAN | 2.62 | n/a | 2.00 | n/a | No Hit | |||
| ZEB2_HUMAN | 2.30 | -2.67 | 1.50 | n/a | n/a | |||
| ZBT26_HUMAN | 2.29 | -2.11 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Uterus, Whole_Blood