rs9916601 chr17:79733220 C>T
- Sequence
caccaggatccctgcacacgcatt[C/T]gtgcctgtgtgcccgtccagctgt
- ASB in cell types
- GM12878 (female B-cells) CD34+ hematopoietic stem cells-derived proerythroblasts
- ASB for transcription factors
- BHE40_HUMAN MEF2B_HUMAN IKZF1_HUMAN SKIL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 2.44 | n/a | 1.33 | n/a | No Hit | |||
| MEF2B_HUMAN | 2.20 | -2.44 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.02 | -0.89 | 1.33 | n/a | No Hit | |||
| SKIL_HUMAN | 2.33 | -2.24 | 1.33 | n/a | n/a | |||
| ELF1_HUMAN | 2.12 | -2.36 | 1.33 | n/a | No Hit |
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Motif analysis
