rs9926107 chr16:8798288 T>C
- Sequence
tcaggcccccttatcagctatgtg[T/C]cggccccaatcctgtaaccaatgg
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- MTG8R_HUMAN HDAC2_HUMAN ERR1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG8R_HUMAN | n/a | 2.57 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | -1.50 | 2.50 | 2.00 | n/a | n/a | |||
| ERR1_HUMAN | n/a | 2.65 | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | n/a | 2.28 | 2.00 | n/a | n/a | |||
| PRD10_HUMAN | n/a | 2.20 | 2.00 | n/a | n/a |
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Motif analysis
