rs9926717 chr16:31460057 A>G
- Sequence
aggtttgcaactcccttgctctct[A/G]gacccgggcagtctggagttcttt
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) CD4+ T-cells liver
- ASB for transcription factors
- BCL6_HUMAN SP2_HUMAN ZBT17_HUMAN HNF4A_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BCL6_HUMAN | 1.77 | -0.77 | 2.25 | n/a | No Hit | |||
| SP2_HUMAN | 1.38 | -0.84 | 1.33 | n/a | No Hit | |||
| ZBT17_HUMAN | 1.57 | -1.85 | 1.33 | n/a | No Hit | |||
| HNF4A_HUMAN | -1.92 | 1.74 | 1.33 | 2.18 | Concordant | |||
| ZBT26_HUMAN | 1.66 | -1.49 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Whole_Blood