rs9927656 chr16:12793321 G>C
- Sequence
gctgtggagacgcgctccagggag[G/C]gggcactgcaagtacccagaccct
- ASB in cell types
- GM23338
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.37 | 0.23 | 1.38 | -4.21 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Colon_Sigmoid, Colon_Transverse, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Nerve_Tibial, Spleen, Whole_Blood