rs993598 chr2:178317968 G>A
- Sequence
ccatttgtttataattgccgtaat[G/A]aagcatgatccgtatgtgcttata
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.43 | 1.61 | 1.82 | n/a | No Hit | |||
| FOXA1_HUMAN | -2.70 | 2.02 | 1.88 | n/a | No Hit |
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