ADASTRA v1.6.10
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rs9957741
chr18:6482787
C
>
T
Sequence
ggaagggcctgcagggaggtcctg[C/T]ggggtcggcccagccccacccaag
ASB in cell types
HEK293 (embryonic kidney)
foreskin keratinocyte
K562 (myelogenous leukemia)
MM1.S (plasma cell myeloma)
ASB for transcription factors
GLIS1_HUMAN
GLIS2_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN
-2.54
0.85
1.00
0.02
2.25
n/a
n/a
GLIS2_HUMAN
n/a
2.19
1.00
0.02
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2-scale
log2(Alt/Ref motif p-value)