rs9961244 chr18:26471265 A>G
- Sequence
ttggtgatgacgcttctgtaatct[A/G]taacacgctgtactcttacaccca
- ASB in cell types
- A549 (lung carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -1.79 | 1.73 | 1.62 | -0.33 | Weak Discordant | |||
| GATA3_HUMAN | -1.72 | 1.65 | 1.33 | n/a | No Hit |
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Motif analysis
