rs2282978 chr7:92635096 T>C

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Detroit 562 (Pharyngeal squamous cell carcinoma) 0.76 -0.26 1.5·10-31.00 1.00
GM12878 (female B-cells lymphoblastoid cell line) 0.60 0.47 0.021.00 1.10
CD14+ monocytes 1.12 -0.58 0.031.00 2.00
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Motif analysis

No data available

Genetic associations

EMBL-EBI diastolic blood pressure,  height,  pulse pressure,  systolic blood pressure
GRASP advanced age-related macular degeneration,  alzheimers disease,  cdk6 expression in lymphocytes,  femur length,  height,  height (adolescents),  height (adults),  height (females),  height (males),  hypertension (early onset hypertension),  ige in plasma,  infant head circumference,  irritible bowel syndrome,  ldl cholesterol,  rheumatoid arthritis,  schizophrenia,  tardive dyskinesia,  total cholesterol
PheWAS abnormal findings on radiological exam of musculoskeletal system,  acid-base balance disorder,  acidosis,  acute cystitis,  arterial embolism and thrombosis,  attention deficit hyperactivity disorder,  blood vessel replaced,  bundle branch block,  cancer within the respiratory system,  cardiac arrest,  cardiac arrest & ventricular fibrillation,  cardiac congenital anomalies,  chronic osteomyelitis,  colles fracture,  colorectal cancer,  colostomy and enterostomy complication,  coma,  stupor,  and brain damage,  complication of amputation stump,  conjunctivitis, infectious,  conjunctivitis, noninfectious,  diseases of respiratory system,  disorders of diaphragm,  dupuytrens disease,  dyschromia and vitiligo,  e. coli,  failure to thrive,  fracture of hand or wrist,  fracture of vertebral column without mention of spinal cord injury,  functional disorders of bladder,  genitourinary congenital anomalies,  hyposmolality and/or hyponatremia,  immune disorders,  impaction of intestine,  infection of the eye,  internal derangement of knee,  keratoconjunctivitis sicca,  lack of normal physiological development,  liver replaced by transplant,  lung cancer,  macular degeneration, dry,  open wound of nose and sinus,  other diseases of respiratory system,  other disorders of ear,  other dyschromia,  other immunological findings,  otitis externa,  pancreatic cancer,  pervasive developmental disorders,  phlebitis and thrombophlebitis,  phlebitis and thrombophlebitis of lower extremities,  protein-calorie malnutrition,  pruritus and related conditions,  pseudoexfoliation glaucoma,  ptosis of eyelid,  spinal stenosis,  unspecified monoarthritis,  urethral hypermobility/isd,  uveitis,  varicose veins,  varicose veins of lower extremity,  ventricular fibrillation & flutter
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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