ADASTRA v5.1.3
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rs322907
chr1:199113428
T
>
G
Sequence
cttgctaagtagttctaccagatg[T/G]cagtggcagcctggaaaggtatcg
ASB in cell types
T47D (invasive ductal carcinoma)
THP-1 (acute monocytic leukemia)
hASC (preadipocytes)
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
T47D (invasive ductal carcinoma)
0.63
1.28
0.93
9.4·10
-4
1.06
THP-1 (acute monocytic leukemia)
1.04
0.39
7.6·10
-3
1.00
2.00
hASC (preadipocytes)
1.71
-0.43
8.6·10
-3
1.00
1.00
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
major depressive disorder
,
obesity with early age of onset (age >2)
,
paternal transmission distortion
,
transmission distortion
GTEx eQTL
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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