rs6545287 chr2:52558416 T>C
- Sequence
ccgtgcatgagggatctagcccca[T/C]gacccaaatacctttcatcaggct
- ASB in cell types
- iPS-derived chondrocytes
- ASB for transcription factors
- RARA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 0.95 | -0.25 | 1.00 | -4.15 | Concordant |
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Motif analysis
