rs78183239 chr1:234981224 T>C
- Sequence
actgcgcaccaggcctggaaggag[T/C]agctccctgcagtgggcctctccc
- ASB in cell types
- CD14+ monocytes CD34+ hematopoietic stem cells MDM(monocyte derived macrophages) Th1-cells
- ASB for transcription factors
- STAT1_HUMAN TIF1B_HUMAN MYB_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.87 | n/a | 2.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 2.91 | n/a | 2.00 | n/a | n/a | |||
| MYB_HUMAN | 2.62 | -4.84 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.41 | -0.55 | 2.38 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Transverse, Liver, Lung, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Vagina, Whole_Blood